Preloader Reset Command Error

I am using ARM DS and the Altera USB-II Blaster to connect to my Cyclone V target board.

When I first connect, I am getting the following error:

# in preloader.ds:12 while executing: reset system
! The reset capability system is not available
ERROR(CMD656): The script preloader.ds failed to complete due to an error during execution of the script

My board still connects but does not reset the SW on connection, however, I am able to step through my program with the debugger. 

I ran the info capabilities command which returned this section for Reset options (no SW options):

Reset options
  Hardware Reset
    Available while running=true [Indicates whether System reset is available while running]

What options do I have to restart the SW on connection instead of jumping in at the current point of execution?