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ISP/IAP invoked via USB HID interface

Dear all,
I have a system developed which does various things using the USB HID interface and is working perfectly. I now wish to implement the ISP/IAP functionality to allow infield reprograming of my device (LPC1343) by invoking it through a HID command.
I have copied all of the required parts from the autoisp example but i am unable to invoke the ISP. Has anybody else does something similar to this? Do i need to some how completely de-initialise the USB system to allow the ISP to be called?

Thanks in advance

Alan

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